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Drive VMD for GROMACS/LAMMPS analysis + clathrate-hydrate cage science (needs a local VMD)
npx @getmcp/cli add io.github.wjgoarxiv/vmd-hydrate-mcpRequires Python 3.10+. Community-contributed server. Review source before installing.
Config file: ~/Library/Application Support/Claude/claude_desktop_config.json
{
"mcpServers": {
"io.github.wjgoarxiv/vmd-hydrate-mcp": {
"command": "uvx",
"args": [
"vmd-hydrate-mcp"
]
}
}
}